Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Foxa1P35582 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.7□□□□□ -0.06
Foxa1P35582 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Foxa1P35582 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Gm25745-201ENSMUST00000174945 133 ntBASIC14.7□□□□□ -0.06
Foxa1P35582 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Foxa1P35582 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Foxa1P35582 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Foxa1P35582 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.69□□□□□ -0.06
Foxa1P35582 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Foxa1P35582 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Foxa1P35582 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.69□□□□□ -0.06
Foxa1P35582 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.69□□□□□ -0.06
Foxa1P35582 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.69□□□□□ -0.06
Foxa1P35582 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.69□□□□□ -0.06
Foxa1P35582 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.69□□□□□ -0.06
Foxa1P35582 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Foxa1P35582 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.68□□□□□ -0.06
Foxa1P35582 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Foxa1P35582 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.68□□□□□ -0.06
Foxa1P35582 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Foxa1P35582 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Foxa1P35582 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Foxa1P35582 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Foxa1P35582 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.68□□□□□ -0.06
Foxa1P35582 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.68□□□□□ -0.06
Foxa1P35582 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.68□□□□□ -0.06
Foxa1P35582 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Foxa1P35582 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Foxa1P35582 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.67□□□□□ -0.06
Foxa1P35582 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Foxa1P35582 Gm12644-201ENSMUST00000119935 606 ntBASIC14.67□□□□□ -0.06
Foxa1P35582 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.67□□□□□ -0.06
Foxa1P35582 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.67□□□□□ -0.06
Foxa1P35582 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Foxa1P35582 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.67□□□□□ -0.06
Foxa1P35582 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.67□□□□□ -0.06
Foxa1P35582 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.67□□□□□ -0.06
Foxa1P35582 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Foxa1P35582 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Foxa1P35582 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Foxa1P35582 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms