Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp13P33435 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.3■□□□□ 0.2
Mmp13P33435 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.3■□□□□ 0.2
Mmp13P33435 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Mmp13P33435 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Gm11336-201ENSMUST00000118168 334 ntBASIC16.3■□□□□ 0.2
Mmp13P33435 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.3■□□□□ 0.2
Mmp13P33435 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Mmp13P33435 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.3■□□□□ 0.2
Mmp13P33435 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
Mmp13P33435 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Mmp13P33435 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp13P33435 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Mmp13P33435 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Asic1-205ENSMUST00000228185 1818 ntBASIC16.29■□□□□ 0.2
Mmp13P33435 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.29■□□□□ 0.2
Mmp13P33435 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Mmp13P33435 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Mmp13P33435 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Gm6623-201ENSMUST00000173570 544 ntBASIC16.29■□□□□ 0.2
Mmp13P33435 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Mmp13P33435 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Mmp13P33435 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Mmp13P33435 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Mmp13P33435 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Mmp13P33435 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.28■□□□□ 0.2
Mmp13P33435 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Mmp13P33435 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.28■□□□□ 0.2
Mmp13P33435 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Mmp13P33435 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.28■□□□□ 0.2
Mmp13P33435 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Mmp13P33435 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Mmp13P33435 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Mmp13P33435 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms