Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Slc6a11P31650 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a11P31650 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a11P31650 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.1■□□□□ 0.01
Slc6a11P31650 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Slc6a11P31650 Mir3081-201ENSMUST00000175305 84 ntBASIC15.1■□□□□ 0.01
Slc6a11P31650 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.1■□□□□ 0.01
Slc6a11P31650 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Slc6a11P31650 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.1■□□□□ 0.01
Slc6a11P31650 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a11P31650 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.09■□□□□ 0.01
Slc6a11P31650 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Slc6a11P31650 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Asic1-205ENSMUST00000228185 1818 ntBASIC15.09■□□□□ 0.01
Slc6a11P31650 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.09■□□□□ 0.01
Slc6a11P31650 Gm11950-201ENSMUST00000121615 838 ntBASIC15.09■□□□□ 0.01
Slc6a11P31650 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.09■□□□□ 0.01
Slc6a11P31650 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Mzt1-203ENSMUST00000227948 952 ntBASIC15.09■□□□□ 0.01
Slc6a11P31650 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Slc6a11P31650 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc6a11P31650 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a11P31650 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a11P31650 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Slc6a11P31650 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.08■□□□□ 0.01
Slc6a11P31650 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a11P31650 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a11P31650 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Slc6a11P31650 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Slc6a11P31650 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc6a11P31650 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.08■□□□□ 0
Slc6a11P31650 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.08■□□□□ 0
Slc6a11P31650 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.08■□□□□ 0
Slc6a11P31650 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.08■□□□□ 0
Slc6a11P31650 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.08■□□□□ 0
Slc6a11P31650 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc6a11P31650 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Slc6a11P31650 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Slc6a11P31650 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.07■□□□□ 0
Slc6a11P31650 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms