Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.43■□□□□ 0.54
Pde6aP27664 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.43■□□□□ 0.54
Pde6aP27664 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6aP27664 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.42■□□□□ 0.54
Pde6aP27664 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.42■□□□□ 0.54
Pde6aP27664 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pde6aP27664 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.42■□□□□ 0.54
Pde6aP27664 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.42■□□□□ 0.54
Pde6aP27664 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.42■□□□□ 0.54
Pde6aP27664 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pde6aP27664 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6aP27664 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6aP27664 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6aP27664 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6aP27664 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6aP27664 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pde6aP27664 Gm8097-201ENSMUST00000117903 829 ntBASIC18.41■□□□□ 0.54
Pde6aP27664 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6aP27664 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.41■□□□□ 0.54
Pde6aP27664 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.41■□□□□ 0.54
Pde6aP27664 Dancr-204ENSMUST00000132389 2347 ntBASIC18.41■□□□□ 0.54
Pde6aP27664 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pde6aP27664 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pde6aP27664 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pde6aP27664 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6aP27664 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.41■□□□□ 0.54
Pde6aP27664 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pde6aP27664 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pde6aP27664 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.4■□□□□ 0.54
Pde6aP27664 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pde6aP27664 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pde6aP27664 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Pde6aP27664 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Gm18622-201ENSMUST00000219361 595 ntBASIC18.4■□□□□ 0.54
Pde6aP27664 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.4■□□□□ 0.54
Pde6aP27664 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pde6aP27664 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pde6aP27664 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pde6aP27664 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
Pde6aP27664 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pde6aP27664 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pde6aP27664 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pde6aP27664 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.39■□□□□ 0.53
Pde6aP27664 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.39■□□□□ 0.53
Pde6aP27664 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.39■□□□□ 0.53
Pde6aP27664 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.39■□□□□ 0.53
Pde6aP27664 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pde6aP27664 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6aP27664 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.38■□□□□ 0.53
Pde6aP27664 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6aP27664 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.38■□□□□ 0.53
Pde6aP27664 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6aP27664 Gm8655-201ENSMUST00000221159 852 ntBASIC18.38■□□□□ 0.53
Pde6aP27664 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.38■□□□□ 0.53
Pde6aP27664 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6aP27664 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pde6aP27664 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Pde6aP27664 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pde6aP27664 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pde6aP27664 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6aP27664 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6aP27664 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pde6aP27664 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.38■□□□□ 0.53
Pde6aP27664 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pde6aP27664 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pde6aP27664 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms