Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col8a2P25318 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col8a2P25318 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Gm15173-201ENSMUST00000122049 433 ntBASIC13.26□□□□□ -0.29
Col8a2P25318 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.26□□□□□ -0.29
Col8a2P25318 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col8a2P25318 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.26□□□□□ -0.29
Col8a2P25318 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.26□□□□□ -0.29
Col8a2P25318 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.26□□□□□ -0.29
Col8a2P25318 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col8a2P25318 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col8a2P25318 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col8a2P25318 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Col8a2P25318 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.25□□□□□ -0.29
Col8a2P25318 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.25□□□□□ -0.29
Col8a2P25318 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col8a2P25318 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Col8a2P25318 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.25□□□□□ -0.29
Col8a2P25318 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.25□□□□□ -0.29
Col8a2P25318 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.25□□□□□ -0.29
Col8a2P25318 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.25□□□□□ -0.29
Col8a2P25318 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.25□□□□□ -0.29
Col8a2P25318 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.25□□□□□ -0.29
Col8a2P25318 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.25□□□□□ -0.29
Col8a2P25318 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Col8a2P25318 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col8a2P25318 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col8a2P25318 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.25□□□□□ -0.29
Col8a2P25318 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col8a2P25318 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.24□□□□□ -0.29
Col8a2P25318 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col8a2P25318 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Col8a2P25318 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col8a2P25318 App-207ENSMUST00000227737 2827 ntBASIC13.24□□□□□ -0.29
Col8a2P25318 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Gm25990-201ENSMUST00000102440 86 ntBASIC13.24□□□□□ -0.29
Col8a2P25318 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Col8a2P25318 Gm27525-201ENSMUST00000184465 107 ntBASIC13.24□□□□□ -0.29
Col8a2P25318 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.24□□□□□ -0.29
Col8a2P25318 Gm2651-201ENSMUST00000203560 838 ntBASIC13.24□□□□□ -0.29
Col8a2P25318 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col8a2P25318 Gm18622-201ENSMUST00000219361 595 ntBASIC13.24□□□□□ -0.29
Col8a2P25318 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.24□□□□□ -0.29
Col8a2P25318 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.24□□□□□ -0.29
Col8a2P25318 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.24□□□□□ -0.29
Col8a2P25318 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.24□□□□□ -0.29
Col8a2P25318 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col8a2P25318 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col8a2P25318 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col8a2P25318 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col8a2P25318 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms