Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6bP23440 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6bP23440 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pde6bP23440 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6bP23440 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6bP23440 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6bP23440 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Pde6bP23440 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pde6bP23440 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.33■□□□□ 0.36
Pde6bP23440 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pde6bP23440 Gm11594-201ENSMUST00000122313 162 ntBASIC17.33■□□□□ 0.36
Pde6bP23440 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.33■□□□□ 0.36
Pde6bP23440 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.33■□□□□ 0.36
Pde6bP23440 AV026068-213ENSMUST00000223675 1171 ntBASIC17.33■□□□□ 0.36
Pde6bP23440 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pde6bP23440 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Pde6bP23440 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Pde6bP23440 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Pde6bP23440 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pde6bP23440 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pde6bP23440 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.32■□□□□ 0.36
Pde6bP23440 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.32■□□□□ 0.36
Pde6bP23440 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.32■□□□□ 0.36
Pde6bP23440 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pde6bP23440 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pde6bP23440 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.32■□□□□ 0.36
Pde6bP23440 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Pde6bP23440 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pde6bP23440 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pde6bP23440 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.31■□□□□ 0.36
Pde6bP23440 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Pde6bP23440 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Gm11780-201ENSMUST00000136880 516 ntBASIC17.31■□□□□ 0.36
Pde6bP23440 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Pde6bP23440 Gm25406-201ENSMUST00000157599 105 ntBASIC17.31■□□□□ 0.36
Pde6bP23440 Gm6550-201ENSMUST00000187574 993 ntBASIC17.31■□□□□ 0.36
Pde6bP23440 Gm5264-201ENSMUST00000190584 848 ntBASIC17.31■□□□□ 0.36
Pde6bP23440 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.31■□□□□ 0.36
Pde6bP23440 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pde6bP23440 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pde6bP23440 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pde6bP23440 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pde6bP23440 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Pde6bP23440 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.3■□□□□ 0.36
Pde6bP23440 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.3■□□□□ 0.36
Pde6bP23440 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Gm11779-201ENSMUST00000118541 368 ntBASIC17.3■□□□□ 0.36
Pde6bP23440 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.3■□□□□ 0.36
Pde6bP23440 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.3■□□□□ 0.36
Pde6bP23440 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.3■□□□□ 0.36
Pde6bP23440 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Pde6bP23440 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.3■□□□□ 0.36
Pde6bP23440 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.3■□□□□ 0.36
Pde6bP23440 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.3■□□□□ 0.36
Pde6bP23440 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pde6bP23440 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Pde6bP23440 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pde6bP23440 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pde6bP23440 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pde6bP23440 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pde6bP23440 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms