Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.8□□□□□ -0.04
Clk1P22518 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.8□□□□□ -0.04
Clk1P22518 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Clk1P22518 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Clk1P22518 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Clk1P22518 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Gm6623-201ENSMUST00000173570 544 ntBASIC14.8□□□□□ -0.04
Clk1P22518 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.8□□□□□ -0.04
Clk1P22518 Gm44430-201ENSMUST00000203376 995 ntBASIC14.8□□□□□ -0.04
Clk1P22518 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.8□□□□□ -0.04
Clk1P22518 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Clk1P22518 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Clk1P22518 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Clk1P22518 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Clk1P22518 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Clk1P22518 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Gm11950-201ENSMUST00000121615 838 ntBASIC14.79□□□□□ -0.04
Clk1P22518 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.79□□□□□ -0.04
Clk1P22518 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Gm10052-201ENSMUST00000168019 960 ntBASIC14.79□□□□□ -0.04
Clk1P22518 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.79□□□□□ -0.04
Clk1P22518 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.79□□□□□ -0.04
Clk1P22518 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.79□□□□□ -0.04
Clk1P22518 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Gm7729-201ENSMUST00000050143 801 ntBASIC14.79□□□□□ -0.04
Clk1P22518 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Clk1P22518 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Clk1P22518 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Clk1P22518 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.79□□□□□ -0.04
Clk1P22518 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.79□□□□□ -0.04
Clk1P22518 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Clk1P22518 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Clk1P22518 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Clk1P22518 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.78□□□□□ -0.04
Clk1P22518 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Clk1P22518 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Clk1P22518 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.78□□□□□ -0.04
Clk1P22518 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Clk1P22518 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.78□□□□□ -0.04
Clk1P22518 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.78□□□□□ -0.04
Clk1P22518 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Clk1P22518 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Clk1P22518 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Clk1P22518 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.78□□□□□ -0.04
Clk1P22518 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms