Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
BdnfP21237 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
BdnfP21237 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.25■□□□□ 0.03
BdnfP21237 Gm26039-201ENSMUST00000158152 144 ntBASIC15.25■□□□□ 0.03
BdnfP21237 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Gm18959-201ENSMUST00000208954 655 ntBASIC15.25■□□□□ 0.03
BdnfP21237 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.25■□□□□ 0.03
BdnfP21237 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
BdnfP21237 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.25■□□□□ 0.03
BdnfP21237 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BdnfP21237 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
BdnfP21237 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.24■□□□□ 0.03
BdnfP21237 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.24■□□□□ 0.03
BdnfP21237 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.24■□□□□ 0.03
BdnfP21237 Mir6982-201ENSMUST00000184354 68 ntBASIC15.24■□□□□ 0.03
BdnfP21237 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.24■□□□□ 0.03
BdnfP21237 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.24■□□□□ 0.03
BdnfP21237 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.24■□□□□ 0.03
BdnfP21237 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.24■□□□□ 0.03
BdnfP21237 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BdnfP21237 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
BdnfP21237 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
BdnfP21237 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.23■□□□□ 0.03
BdnfP21237 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.23■□□□□ 0.03
BdnfP21237 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
BdnfP21237 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.23■□□□□ 0.03
BdnfP21237 Mir1668-201ENSMUST00000184114 107 ntBASIC15.23■□□□□ 0.03
BdnfP21237 Gm45058-201ENSMUST00000205810 766 ntBASIC15.23■□□□□ 0.03
BdnfP21237 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
BdnfP21237 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
BdnfP21237 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.23■□□□□ 0.03
BdnfP21237 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
BdnfP21237 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BdnfP21237 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
BdnfP21237 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.22■□□□□ 0.03
BdnfP21237 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
BdnfP21237 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.22■□□□□ 0.03
BdnfP21237 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.22■□□□□ 0.03
BdnfP21237 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BdnfP21237 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.22■□□□□ 0.03
BdnfP21237 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms