Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Kcna1P16388 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Kcna1P16388 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Kcna1P16388 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Kcna1P16388 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Kcna1P16388 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Gm25990-201ENSMUST00000102440 86 ntBASIC18.01■□□□□ 0.47
Kcna1P16388 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Kcna1P16388 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.01■□□□□ 0.47
Kcna1P16388 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.01■□□□□ 0.47
Kcna1P16388 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.01■□□□□ 0.47
Kcna1P16388 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.01■□□□□ 0.47
Kcna1P16388 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.01■□□□□ 0.47
Kcna1P16388 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.01■□□□□ 0.47
Kcna1P16388 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Grk6-207ENSMUST00000225925 2769 ntBASIC18.01■□□□□ 0.47
Kcna1P16388 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Kcna1P16388 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Kcna1P16388 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.01■□□□□ 0.47
Kcna1P16388 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18■□□□□ 0.47
Kcna1P16388 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18■□□□□ 0.47
Kcna1P16388 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Kcna1P16388 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Gm9954-202ENSMUST00000198686 4725 ntBASIC18■□□□□ 0.47
Kcna1P16388 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18■□□□□ 0.47
Kcna1P16388 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18■□□□□ 0.47
Kcna1P16388 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Kcna1P16388 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Kcna1P16388 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Kcna1P16388 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.99■□□□□ 0.47
Kcna1P16388 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.99■□□□□ 0.47
Kcna1P16388 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Kcna1P16388 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.98■□□□□ 0.47
Kcna1P16388 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.98■□□□□ 0.47
Kcna1P16388 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.98■□□□□ 0.47
Kcna1P16388 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.98■□□□□ 0.47
Kcna1P16388 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.98■□□□□ 0.47
Kcna1P16388 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.98■□□□□ 0.47
Kcna1P16388 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.98■□□□□ 0.47
Kcna1P16388 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Kcna1P16388 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Kcna1P16388 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Kcna1P16388 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Kcna1P16388 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Gm6089-201ENSMUST00000197666 938 ntBASIC17.97■□□□□ 0.47
Kcna1P16388 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Kcna1P16388 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms