Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Rb1P13405 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.24■□□□□ 0.19
Rb1P13405 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Rb1P13405 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.24■□□□□ 0.19
Rb1P13405 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rb1P13405 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Gm6376-201ENSMUST00000209407 580 ntBASIC16.24■□□□□ 0.19
Rb1P13405 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.24■□□□□ 0.19
Rb1P13405 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rb1P13405 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rb1P13405 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rb1P13405 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Gm7862-201ENSMUST00000121461 292 ntBASIC16.23■□□□□ 0.19
Rb1P13405 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rb1P13405 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rb1P13405 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rb1P13405 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.22■□□□□ 0.19
Rb1P13405 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.22■□□□□ 0.19
Rb1P13405 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rb1P13405 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rb1P13405 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Gm44454-201ENSMUST00000198541 138 ntBASIC16.22■□□□□ 0.19
Rb1P13405 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rb1P13405 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rb1P13405 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rb1P13405 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.21■□□□□ 0.19
Rb1P13405 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Rb1P13405 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rb1P13405 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rb1P13405 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rb1P13405 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.21■□□□□ 0.19
Rb1P13405 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.21■□□□□ 0.19
Rb1P13405 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.21■□□□□ 0.19
Rb1P13405 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.21■□□□□ 0.19
Rb1P13405 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rb1P13405 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rb1P13405 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rb1P13405 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rb1P13405 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rb1P13405 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rb1P13405 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rb1P13405 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rb1P13405 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Rb1P13405 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.2■□□□□ 0.18
Rb1P13405 Gm15165-201ENSMUST00000118140 502 ntBASIC16.2■□□□□ 0.18
Rb1P13405 Gm27525-201ENSMUST00000184465 107 ntBASIC16.2■□□□□ 0.18
Rb1P13405 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.2■□□□□ 0.18
Rb1P13405 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Gm6296-201ENSMUST00000222599 943 ntBASIC16.2■□□□□ 0.18
Rb1P13405 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rb1P13405 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms