Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04214 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
P04214 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.56■□□□□ 0.24
P04214 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
P04214 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
P04214 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.56■□□□□ 0.24
P04214 Gm12008-201ENSMUST00000117791 755 ntBASIC16.56■□□□□ 0.24
P04214 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.56■□□□□ 0.24
P04214 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.56■□□□□ 0.24
P04214 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.56■□□□□ 0.24
P04214 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.56■□□□□ 0.24
P04214 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
P04214 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04214 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.55■□□□□ 0.24
P04214 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
P04214 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04214 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.55■□□□□ 0.24
P04214 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.55■□□□□ 0.24
P04214 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04214 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04214 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.55■□□□□ 0.24
P04214 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
P04214 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04214 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04214 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.54■□□□□ 0.24
P04214 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04214 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.54■□□□□ 0.24
P04214 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04214 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
P04214 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04214 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04214 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04214 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.54■□□□□ 0.24
P04214 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04214 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
P04214 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.54■□□□□ 0.24
P04214 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.54■□□□□ 0.24
P04214 Gm22065-201ENSMUST00000103753 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm22066-201ENSMUST00000103761 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm24932-201ENSMUST00000103763 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm24115-201ENSMUST00000103799 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm22190-201ENSMUST00000103827 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm22191-201ENSMUST00000103831 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm24721-201ENSMUST00000103849 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm28018-201ENSMUST00000103869 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm26399-201ENSMUST00000103937 110 ntBASIC16.54■□□□□ 0.24
P04214 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
P04214 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04214 Gm16198-201ENSMUST00000118766 670 ntBASIC16.54■□□□□ 0.24
P04214 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04214 Gm25349-201ENSMUST00000177728 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm23616-201ENSMUST00000177797 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm25871-201ENSMUST00000177816 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm24752-201ENSMUST00000178240 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm24496-201ENSMUST00000178287 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm25649-201ENSMUST00000178476 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm25548-201ENSMUST00000178681 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm23147-201ENSMUST00000178841 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm26095-201ENSMUST00000179270 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm22171-201ENSMUST00000179283 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm23936-201ENSMUST00000179354 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm22619-201ENSMUST00000179516 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm25255-201ENSMUST00000179579 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm24755-201ENSMUST00000179691 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm26506-201ENSMUST00000179692 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm25086-201ENSMUST00000179931 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm23243-201ENSMUST00000180047 110 ntBASIC16.54■□□□□ 0.24
P04214 Gm24659-201ENSMUST00000180212 110 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms