Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CfdP03953 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CfdP03953 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CfdP03953 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CfdP03953 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CfdP03953 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CfdP03953 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CfdP03953 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CfdP03953 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CfdP03953 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CfdP03953 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CfdP03953 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.3□□□□□ -0.28
CfdP03953 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.3□□□□□ -0.28
CfdP03953 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.3□□□□□ -0.28
CfdP03953 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CfdP03953 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CfdP03953 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CfdP03953 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CfdP03953 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CfdP03953 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.29□□□□□ -0.28
CfdP03953 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.29□□□□□ -0.28
CfdP03953 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CfdP03953 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.29□□□□□ -0.28
CfdP03953 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.29□□□□□ -0.28
CfdP03953 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.29□□□□□ -0.28
CfdP03953 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CfdP03953 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.29□□□□□ -0.28
CfdP03953 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.29□□□□□ -0.28
CfdP03953 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CfdP03953 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CfdP03953 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CfdP03953 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.28□□□□□ -0.28
CfdP03953 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CfdP03953 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Sybu-209ENSMUST00000228639 4113 ntBASIC13.28□□□□□ -0.28
CfdP03953 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.28□□□□□ -0.28
CfdP03953 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.28□□□□□ -0.28
CfdP03953 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Gm10698-201ENSMUST00000182663 604 ntBASIC13.28□□□□□ -0.28
CfdP03953 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CfdP03953 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CfdP03953 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CfdP03953 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CfdP03953 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CfdP03953 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CfdP03953 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms