Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
Hoxa3P02831 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxa3P02831 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.31□□□□□ -0.28
Hoxa3P02831 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Gm6296-201ENSMUST00000222599 943 ntBASIC13.31□□□□□ -0.28
Hoxa3P02831 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.31□□□□□ -0.28
Hoxa3P02831 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxa3P02831 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxa3P02831 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.3□□□□□ -0.28
Hoxa3P02831 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.3□□□□□ -0.28
Hoxa3P02831 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxa3P02831 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hoxa3P02831 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Hoxa3P02831 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Hoxa3P02831 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.29□□□□□ -0.28
Hoxa3P02831 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.29□□□□□ -0.28
Hoxa3P02831 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.29□□□□□ -0.28
Hoxa3P02831 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxa3P02831 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms