Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.11■□□□□ 0.33
Vti1aO89116 Gm13418-201ENSMUST00000119097 944 ntBASIC17.11■□□□□ 0.33
Vti1aO89116 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.11■□□□□ 0.33
Vti1aO89116 Gm4535-201ENSMUST00000182274 558 ntBASIC17.11■□□□□ 0.33
Vti1aO89116 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Gm10355-201ENSMUST00000097146 517 ntBASIC17.11■□□□□ 0.33
Vti1aO89116 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Vti1aO89116 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.11■□□□□ 0.33
Vti1aO89116 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vti1aO89116 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.1■□□□□ 0.33
Vti1aO89116 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.1■□□□□ 0.33
Vti1aO89116 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vti1aO89116 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vti1aO89116 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vti1aO89116 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vti1aO89116 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.1■□□□□ 0.33
Vti1aO89116 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vti1aO89116 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vti1aO89116 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.09■□□□□ 0.33
Vti1aO89116 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.09■□□□□ 0.33
Vti1aO89116 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.09■□□□□ 0.33
Vti1aO89116 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.09■□□□□ 0.33
Vti1aO89116 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.09■□□□□ 0.33
Vti1aO89116 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.09■□□□□ 0.33
Vti1aO89116 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.09■□□□□ 0.33
Vti1aO89116 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vti1aO89116 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Vti1aO89116 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vti1aO89116 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vti1aO89116 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vti1aO89116 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vti1aO89116 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.08■□□□□ 0.33
Vti1aO89116 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vti1aO89116 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vti1aO89116 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Vti1aO89116 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vti1aO89116 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vti1aO89116 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.08■□□□□ 0.32
Vti1aO89116 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.08■□□□□ 0.32
Vti1aO89116 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vti1aO89116 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vti1aO89116 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Vti1aO89116 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.08■□□□□ 0.32
Vti1aO89116 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vti1aO89116 Mir5126-201ENSMUST00000175513 77 ntBASIC17.08■□□□□ 0.32
Vti1aO89116 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.08■□□□□ 0.32
Vti1aO89116 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.08■□□□□ 0.32
Vti1aO89116 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.08■□□□□ 0.32
Vti1aO89116 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.08■□□□□ 0.32
Vti1aO89116 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vti1aO89116 Gm15590-201ENSMUST00000078419 552 ntBASIC17.08■□□□□ 0.32
Vti1aO89116 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.08■□□□□ 0.32
Vti1aO89116 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vti1aO89116 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vti1aO89116 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms