Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.38□□□□□ -0.11
Abcd4O89016 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Abcd4O89016 Gm18733-201ENSMUST00000173950 856 ntBASIC14.38□□□□□ -0.11
Abcd4O89016 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.38□□□□□ -0.11
Abcd4O89016 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Abcd4O89016 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Abcd4O89016 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Abcd4O89016 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Abcd4O89016 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.38□□□□□ -0.11
Abcd4O89016 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Abcd4O89016 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.38□□□□□ -0.11
Abcd4O89016 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Abcd4O89016 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Abcd4O89016 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.37□□□□□ -0.11
Abcd4O89016 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.37□□□□□ -0.11
Abcd4O89016 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Abcd4O89016 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Abcd4O89016 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Abcd4O89016 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.36□□□□□ -0.11
Abcd4O89016 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Abcd4O89016 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Abcd4O89016 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.36□□□□□ -0.11
Abcd4O89016 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Abcd4O89016 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.36□□□□□ -0.11
Abcd4O89016 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.36□□□□□ -0.11
Abcd4O89016 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abcd4O89016 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Abcd4O89016 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.35□□□□□ -0.11
Abcd4O89016 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.35□□□□□ -0.11
Abcd4O89016 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.35□□□□□ -0.11
Abcd4O89016 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abcd4O89016 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms