Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.31■□□□□ 0.2
Syn1O88935 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Syn1O88935 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Syn1O88935 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Syn1O88935 Mir449b-201ENSMUST00000104833 80 ntBASIC16.3■□□□□ 0.2
Syn1O88935 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.3■□□□□ 0.2
Syn1O88935 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.3■□□□□ 0.2
Syn1O88935 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.3■□□□□ 0.2
Syn1O88935 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.3■□□□□ 0.2
Syn1O88935 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.3■□□□□ 0.2
Syn1O88935 Gm45747-201ENSMUST00000212203 999 ntBASIC16.3■□□□□ 0.2
Syn1O88935 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Syn1O88935 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Syn1O88935 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Syn1O88935 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Syn1O88935 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Syn1O88935 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syn1O88935 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Syn1O88935 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Syn1O88935 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.29■□□□□ 0.2
Syn1O88935 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.29■□□□□ 0.2
Syn1O88935 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.29■□□□□ 0.2
Syn1O88935 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.29■□□□□ 0.2
Syn1O88935 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.29■□□□□ 0.2
Syn1O88935 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.29■□□□□ 0.2
Syn1O88935 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syn1O88935 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Syn1O88935 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Syn1O88935 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Syn1O88935 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.28■□□□□ 0.2
Syn1O88935 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.28■□□□□ 0.2
Syn1O88935 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Syn1O88935 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.28■□□□□ 0.2
Syn1O88935 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Syn1O88935 Gm4518-201ENSMUST00000182638 718 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.28■□□□□ 0.2
Syn1O88935 Gm27301-201ENSMUST00000184012 127 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms