Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh2d1aO88890 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Sh2d1aO88890 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.29□□□□□ -0.6
Sh2d1aO88890 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Mir7071-201ENSMUST00000184847 69 ntBASIC11.28□□□□□ -0.6
Sh2d1aO88890 Gm37722-201ENSMUST00000193757 208 ntBASIC11.28□□□□□ -0.6
Sh2d1aO88890 Gm29707-201ENSMUST00000196325 491 ntBASIC11.28□□□□□ -0.6
Sh2d1aO88890 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.28□□□□□ -0.6
Sh2d1aO88890 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sh2d1aO88890 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh2d1aO88890 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sh2d1aO88890 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh2d1aO88890 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh2d1aO88890 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh2d1aO88890 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh2d1aO88890 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh2d1aO88890 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh2d1aO88890 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh2d1aO88890 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh2d1aO88890 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sh2d1aO88890 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.27□□□□□ -0.61
Sh2d1aO88890 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh2d1aO88890 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh2d1aO88890 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms