Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hcn1O88704 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hcn1O88704 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Hcn1O88704 Gm27704-201ENSMUST00000185094 107 ntBASIC15.26■□□□□ 0.03
Hcn1O88704 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hcn1O88704 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Hcn1O88704 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.26■□□□□ 0.03
Hcn1O88704 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.26■□□□□ 0.03
Hcn1O88704 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn1O88704 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.25■□□□□ 0.03
Hcn1O88704 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hcn1O88704 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.25■□□□□ 0.03
Hcn1O88704 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.25■□□□□ 0.03
Hcn1O88704 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hcn1O88704 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn1O88704 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.24■□□□□ 0.03
Hcn1O88704 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Hcn1O88704 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.24■□□□□ 0.03
Hcn1O88704 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hcn1O88704 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.24■□□□□ 0.03
Hcn1O88704 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Hcn1O88704 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn1O88704 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Hcn1O88704 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hcn1O88704 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.23■□□□□ 0.03
Hcn1O88704 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.23■□□□□ 0.03
Hcn1O88704 Gm45328-201ENSMUST00000210942 917 ntBASIC15.23■□□□□ 0.03
Hcn1O88704 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Hcn1O88704 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn1O88704 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hcn1O88704 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hcn1O88704 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcn1O88704 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms