Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cops6O88545 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops6O88545 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cops6O88545 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Cops6O88545 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.35■□□□□ 0.69
Cops6O88545 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops6O88545 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.34■□□□□ 0.69
Cops6O88545 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.34■□□□□ 0.69
Cops6O88545 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Gm18489-201ENSMUST00000172565 551 ntBASIC19.34■□□□□ 0.69
Cops6O88545 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Haglr-201ENSMUST00000100000 2085 ntBASIC19.34■□□□□ 0.69
Cops6O88545 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.34■□□□□ 0.69
Cops6O88545 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.34■□□□□ 0.69
Cops6O88545 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops6O88545 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.33■□□□□ 0.69
Cops6O88545 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cops6O88545 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cops6O88545 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cops6O88545 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cops6O88545 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cops6O88545 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cops6O88545 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.33■□□□□ 0.68
Cops6O88545 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.33■□□□□ 0.68
Cops6O88545 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cops6O88545 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cops6O88545 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.33■□□□□ 0.68
Cops6O88545 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cops6O88545 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cops6O88545 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops6O88545 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cops6O88545 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.32■□□□□ 0.68
Cops6O88545 Gm7787-201ENSMUST00000216858 688 ntBASIC19.32■□□□□ 0.68
Cops6O88545 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Cops6O88545 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cops6O88545 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.32■□□□□ 0.68
Cops6O88545 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops6O88545 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cops6O88545 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cops6O88545 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms