Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.41■□□□□ 0.06
Cacna1hO88427 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.41■□□□□ 0.06
Cacna1hO88427 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cacna1hO88427 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cacna1hO88427 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cacna1hO88427 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Gm12008-201ENSMUST00000117791 755 ntBASIC15.4■□□□□ 0.06
Cacna1hO88427 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Cacna1hO88427 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Gm6745-201ENSMUST00000199216 526 ntBASIC15.4■□□□□ 0.06
Cacna1hO88427 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.4■□□□□ 0.06
Cacna1hO88427 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Syt7-204ENSMUST00000223586 1344 ntBASIC15.4■□□□□ 0.06
Cacna1hO88427 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Gm15321-201ENSMUST00000121290 288 ntBASIC15.4■□□□□ 0.06
Cacna1hO88427 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.4■□□□□ 0.06
Cacna1hO88427 Gm9908-201ENSMUST00000211534 448 ntBASIC15.4■□□□□ 0.06
Cacna1hO88427 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cacna1hO88427 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cacna1hO88427 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Cacna1hO88427 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Gm6415-201ENSMUST00000118488 348 ntBASIC15.39■□□□□ 0.05
Cacna1hO88427 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cacna1hO88427 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cacna1hO88427 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cacna1hO88427 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.39■□□□□ 0.05
Cacna1hO88427 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cacna1hO88427 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cacna1hO88427 Gm27838-201ENSMUST00000184829 128 ntBASIC15.39■□□□□ 0.05
Cacna1hO88427 Gm6888-201ENSMUST00000221983 706 ntBASIC15.39■□□□□ 0.05
Cacna1hO88427 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cacna1hO88427 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.38■□□□□ 0.05
Cacna1hO88427 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cacna1hO88427 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Gm12859-201ENSMUST00000117834 427 ntBASIC15.38■□□□□ 0.05
Cacna1hO88427 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.38■□□□□ 0.05
Cacna1hO88427 Gm9063-201ENSMUST00000223299 582 ntBASIC15.38■□□□□ 0.05
Cacna1hO88427 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cacna1hO88427 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cacna1hO88427 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cacna1hO88427 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.38■□□□□ 0.05
Cacna1hO88427 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cacna1hO88427 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1hO88427 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cacna1hO88427 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1hO88427 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.37■□□□□ 0.05
Cacna1hO88427 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1hO88427 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.37■□□□□ 0.05
Cacna1hO88427 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1hO88427 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1hO88427 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1hO88427 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.37■□□□□ 0.05
Cacna1hO88427 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.37■□□□□ 0.05
Cacna1hO88427 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cacna1hO88427 Gm18737-201ENSMUST00000173594 937 ntBASIC15.37■□□□□ 0.05
Cacna1hO88427 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.37■□□□□ 0.05
Cacna1hO88427 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms