Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Grk6-207ENSMUST00000225925 2769 ntBASIC17.44■□□□□ 0.38
Trdmt1O55055 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Trdmt1O55055 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Trdmt1O55055 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.44■□□□□ 0.38
Trdmt1O55055 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.44■□□□□ 0.38
Trdmt1O55055 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trdmt1O55055 Gm8396-201ENSMUST00000057361 823 ntBASIC17.44■□□□□ 0.38
Trdmt1O55055 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.44■□□□□ 0.38
Trdmt1O55055 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Trdmt1O55055 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trdmt1O55055 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trdmt1O55055 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.43■□□□□ 0.38
Trdmt1O55055 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trdmt1O55055 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.43■□□□□ 0.38
Trdmt1O55055 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.43■□□□□ 0.38
Trdmt1O55055 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trdmt1O55055 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.43■□□□□ 0.38
Trdmt1O55055 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.43■□□□□ 0.38
Trdmt1O55055 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Trdmt1O55055 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.43■□□□□ 0.38
Trdmt1O55055 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trdmt1O55055 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.42■□□□□ 0.38
Trdmt1O55055 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Trdmt1O55055 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.42■□□□□ 0.38
Trdmt1O55055 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.42■□□□□ 0.38
Trdmt1O55055 Gm45747-201ENSMUST00000212203 999 ntBASIC17.42■□□□□ 0.38
Trdmt1O55055 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.42■□□□□ 0.38
Trdmt1O55055 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Trdmt1O55055 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trdmt1O55055 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.42■□□□□ 0.38
Trdmt1O55055 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trdmt1O55055 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trdmt1O55055 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trdmt1O55055 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trdmt1O55055 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trdmt1O55055 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trdmt1O55055 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trdmt1O55055 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trdmt1O55055 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trdmt1O55055 Gm13216-201ENSMUST00000117145 591 ntBASIC17.41■□□□□ 0.38
Trdmt1O55055 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.41■□□□□ 0.38
Trdmt1O55055 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.41■□□□□ 0.38
Trdmt1O55055 Gm5177-201ENSMUST00000183092 997 ntBASIC17.41■□□□□ 0.38
Trdmt1O55055 Gm27494-201ENSMUST00000184735 189 ntBASIC17.41■□□□□ 0.38
Trdmt1O55055 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.41■□□□□ 0.38
Trdmt1O55055 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trdmt1O55055 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trdmt1O55055 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trdmt1O55055 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trdmt1O55055 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.41■□□□□ 0.38
Trdmt1O55055 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trdmt1O55055 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Trdmt1O55055 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.4■□□□□ 0.38
Trdmt1O55055 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trdmt1O55055 Haglr-201ENSMUST00000100000 2085 ntBASIC17.4■□□□□ 0.38
Trdmt1O55055 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms