Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.68□□□□□ -0.22
DffbO54788 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DffbO54788 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.68□□□□□ -0.22
DffbO54788 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.68□□□□□ -0.22
DffbO54788 Gm7213-201ENSMUST00000215977 950 ntBASIC13.68□□□□□ -0.22
DffbO54788 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.68□□□□□ -0.22
DffbO54788 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DffbO54788 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.68□□□□□ -0.22
DffbO54788 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DffbO54788 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DffbO54788 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
DffbO54788 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.67□□□□□ -0.22
DffbO54788 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.67□□□□□ -0.22
DffbO54788 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
DffbO54788 Gm10252-201ENSMUST00000209541 832 ntBASIC13.67□□□□□ -0.22
DffbO54788 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
DffbO54788 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.67□□□□□ -0.22
DffbO54788 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.67□□□□□ -0.22
DffbO54788 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.67□□□□□ -0.22
DffbO54788 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
DffbO54788 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DffbO54788 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.67□□□□□ -0.22
DffbO54788 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
DffbO54788 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
DffbO54788 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Gm16061-201ENSMUST00000122167 857 ntBASIC13.66□□□□□ -0.22
DffbO54788 Gm2274-201ENSMUST00000184539 609 ntBASIC13.66□□□□□ -0.22
DffbO54788 Gm29707-201ENSMUST00000196325 491 ntBASIC13.66□□□□□ -0.22
DffbO54788 Gm30025-201ENSMUST00000218555 728 ntBASIC13.66□□□□□ -0.22
DffbO54788 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
DffbO54788 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
DffbO54788 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
DffbO54788 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DffbO54788 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms