Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.13■□□□□ 0.33
Clcn6O35454 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clcn6O35454 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clcn6O35454 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Gm10012-202ENSMUST00000170379 372 ntBASIC17.13■□□□□ 0.33
Clcn6O35454 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.13■□□□□ 0.33
Clcn6O35454 Gm43952-201ENSMUST00000203765 751 ntBASIC17.13■□□□□ 0.33
Clcn6O35454 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC17.13■□□□□ 0.33
Clcn6O35454 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.13■□□□□ 0.33
Clcn6O35454 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Clcn6O35454 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn6O35454 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clcn6O35454 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clcn6O35454 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.12■□□□□ 0.33
Clcn6O35454 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Clcn6O35454 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clcn6O35454 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC17.12■□□□□ 0.33
Clcn6O35454 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.12■□□□□ 0.33
Clcn6O35454 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Clcn6O35454 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.12■□□□□ 0.33
Clcn6O35454 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn6O35454 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.11■□□□□ 0.33
Clcn6O35454 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.11■□□□□ 0.33
Clcn6O35454 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.11■□□□□ 0.33
Clcn6O35454 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC17.11■□□□□ 0.33
Clcn6O35454 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC17.11■□□□□ 0.33
Clcn6O35454 Gm18717-201ENSMUST00000192744 1241 ntBASIC17.11■□□□□ 0.33
Clcn6O35454 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Gm43452-201ENSMUST00000201873 991 ntBASIC17.11■□□□□ 0.33
Clcn6O35454 AC153968.2-201ENSMUST00000215579 1140 ntBASIC17.11■□□□□ 0.33
Clcn6O35454 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.11■□□□□ 0.33
Clcn6O35454 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.11■□□□□ 0.33
Clcn6O35454 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn6O35454 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Clcn6O35454 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.1■□□□□ 0.33
Clcn6O35454 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Mir5122-201ENSMUST00000175004 89 ntBASIC17.1■□□□□ 0.33
Clcn6O35454 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Clcn6O35454 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Clcn6O35454 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC17.1■□□□□ 0.33
Clcn6O35454 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC17.1■□□□□ 0.33
Clcn6O35454 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.1■□□□□ 0.33
Clcn6O35454 Gm45259-201ENSMUST00000209217 1006 ntBASIC17.1■□□□□ 0.33
Clcn6O35454 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 CT025639.2-201ENSMUST00000224440 1220 ntBASIC17.1■□□□□ 0.33
Clcn6O35454 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.1■□□□□ 0.33
Clcn6O35454 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn6O35454 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms