Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Efnb3O35393 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Efnb3O35393 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Efnb3O35393 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Efnb3O35393 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Efnb3O35393 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.59□□□□□ -0.39
Efnb3O35393 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Efnb3O35393 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Efnb3O35393 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Efnb3O35393 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.59□□□□□ -0.39
Efnb3O35393 Gm10252-201ENSMUST00000209541 832 ntBASIC12.59□□□□□ -0.39
Efnb3O35393 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.59□□□□□ -0.39
Efnb3O35393 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.59□□□□□ -0.39
Efnb3O35393 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Efnb3O35393 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Efnb3O35393 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Efnb3O35393 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Efnb3O35393 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Efnb3O35393 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Efnb3O35393 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
Efnb3O35393 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.58□□□□□ -0.4
Efnb3O35393 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Efnb3O35393 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Efnb3O35393 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.58□□□□□ -0.4
Efnb3O35393 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Efnb3O35393 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Efnb3O35393 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Efnb3O35393 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Efnb3O35393 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Efnb3O35393 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.57□□□□□ -0.4
Efnb3O35393 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.57□□□□□ -0.4
Efnb3O35393 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Efnb3O35393 Gm44450-201ENSMUST00000199528 114 ntBASIC12.57□□□□□ -0.4
Efnb3O35393 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Efnb3O35393 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Efnb3O35393 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.57□□□□□ -0.4
Efnb3O35393 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Efnb3O35393 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms