Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col15a1O35206 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col15a1O35206 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col15a1O35206 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.24■□□□□ 0.83
Col15a1O35206 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.24■□□□□ 0.83
Col15a1O35206 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.24■□□□□ 0.83
Col15a1O35206 Gm20949-201ENSMUST00000206478 952 ntBASIC20.24■□□□□ 0.83
Col15a1O35206 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.24■□□□□ 0.83
Col15a1O35206 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.24■□□□□ 0.83
Col15a1O35206 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.24■□□□□ 0.83
Col15a1O35206 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col15a1O35206 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC20.23■□□□□ 0.83
Col15a1O35206 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.23■□□□□ 0.83
Col15a1O35206 Gm25948-201ENSMUST00000175334 112 ntBASIC20.23■□□□□ 0.83
Col15a1O35206 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.23■□□□□ 0.83
Col15a1O35206 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.23■□□□□ 0.83
Col15a1O35206 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC20.23■□□□□ 0.83
Col15a1O35206 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.23■□□□□ 0.83
Col15a1O35206 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col15a1O35206 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col15a1O35206 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col15a1O35206 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.22■□□□□ 0.83
Col15a1O35206 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Col15a1O35206 Gm43125-201ENSMUST00000201724 730 ntBASIC20.22■□□□□ 0.83
Col15a1O35206 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col15a1O35206 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col15a1O35206 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.22■□□□□ 0.83
Col15a1O35206 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col15a1O35206 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col15a1O35206 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Col15a1O35206 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col15a1O35206 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col15a1O35206 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC20.21■□□□□ 0.83
Col15a1O35206 Gm12008-201ENSMUST00000117791 755 ntBASIC20.21■□□□□ 0.83
Col15a1O35206 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Col15a1O35206 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.21■□□□□ 0.83
Col15a1O35206 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.21■□□□□ 0.83
Col15a1O35206 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Col15a1O35206 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Col15a1O35206 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col15a1O35206 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col15a1O35206 Rprl2-201ENSMUST00000157150 290 ntBASIC20.21■□□□□ 0.83
Col15a1O35206 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Col15a1O35206 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Col15a1O35206 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.21■□□□□ 0.83
Col15a1O35206 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col15a1O35206 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col15a1O35206 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col15a1O35206 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Col15a1O35206 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.2■□□□□ 0.82
Col15a1O35206 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Col15a1O35206 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.2■□□□□ 0.82
Col15a1O35206 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col15a1O35206 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.2■□□□□ 0.82
Col15a1O35206 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms