Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac1O09106 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Hdac1O09106 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Hdac1O09106 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Hdac1O09106 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Hdac1O09106 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.92■□□□□ 0.62
Hdac1O09106 Gm21559-201ENSMUST00000220638 855 ntBASIC18.92■□□□□ 0.62
Hdac1O09106 Gm8587-201ENSMUST00000076538 843 ntBASIC18.92■□□□□ 0.62
Hdac1O09106 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Hdac1O09106 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac1O09106 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hdac1O09106 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.91■□□□□ 0.62
Hdac1O09106 Gm6257-201ENSMUST00000163864 910 ntBASIC18.91■□□□□ 0.62
Hdac1O09106 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.91■□□□□ 0.62
Hdac1O09106 Gm18959-201ENSMUST00000208954 655 ntBASIC18.91■□□□□ 0.62
Hdac1O09106 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Hdac1O09106 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hdac1O09106 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.91■□□□□ 0.62
Hdac1O09106 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac1O09106 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac1O09106 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac1O09106 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac1O09106 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.9■□□□□ 0.62
Hdac1O09106 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.9■□□□□ 0.62
Hdac1O09106 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac1O09106 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac1O09106 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac1O09106 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Hdac1O09106 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.89■□□□□ 0.61
Hdac1O09106 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.89■□□□□ 0.61
Hdac1O09106 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.89■□□□□ 0.61
Hdac1O09106 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.89■□□□□ 0.61
Hdac1O09106 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hdac1O09106 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Hdac1O09106 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac1O09106 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hdac1O09106 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac1O09106 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Hdac1O09106 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac1O09106 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.88■□□□□ 0.61
Hdac1O09106 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.88■□□□□ 0.61
Hdac1O09106 Gm27389-201ENSMUST00000183622 195 ntBASIC18.88■□□□□ 0.61
Hdac1O09106 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.88■□□□□ 0.61
Hdac1O09106 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac1O09106 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac1O09106 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac1O09106 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac1O09106 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Hdac1O09106 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hdac1O09106 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.88■□□□□ 0.61
Hdac1O09106 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms