Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.14■□□□□ 0.01
ClockO08785 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.14■□□□□ 0.01
ClockO08785 Gm15378-201ENSMUST00000121894 207 ntBASIC15.14■□□□□ 0.01
ClockO08785 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ClockO08785 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.14■□□□□ 0.01
ClockO08785 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.14■□□□□ 0.01
ClockO08785 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.14■□□□□ 0.01
ClockO08785 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
ClockO08785 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClockO08785 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
ClockO08785 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.13■□□□□ 0.01
ClockO08785 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ClockO08785 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Gm38027-201ENSMUST00000192315 235 ntBASIC15.13■□□□□ 0.01
ClockO08785 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.13■□□□□ 0.01
ClockO08785 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.13■□□□□ 0.01
ClockO08785 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClockO08785 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
ClockO08785 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.12■□□□□ 0.01
ClockO08785 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ClockO08785 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.12■□□□□ 0.01
ClockO08785 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
ClockO08785 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ClockO08785 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ClockO08785 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
ClockO08785 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ClockO08785 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ClockO08785 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClockO08785 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.11■□□□□ 0.01
ClockO08785 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.11■□□□□ 0.01
ClockO08785 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ClockO08785 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.11■□□□□ 0.01
ClockO08785 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ClockO08785 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ClockO08785 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.11■□□□□ 0.01
ClockO08785 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.11■□□□□ 0.01
ClockO08785 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.11■□□□□ 0.01
ClockO08785 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.11■□□□□ 0.01
ClockO08785 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ClockO08785 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ClockO08785 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.11■□□□□ 0.01
ClockO08785 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ClockO08785 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.11■□□□□ 0.01
ClockO08785 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClockO08785 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClockO08785 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClockO08785 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClockO08785 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClockO08785 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClockO08785 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClockO08785 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ClockO08785 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms