Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Usp35M0QWN7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp35M0QWN7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.03■□□□□ 0.32
Usp35M0QWN7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Usp35M0QWN7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp35M0QWN7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.02■□□□□ 0.31
Usp35M0QWN7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp35M0QWN7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.01■□□□□ 0.31
Usp35M0QWN7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp35M0QWN7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp35M0QWN7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17■□□□□ 0.31
Usp35M0QWN7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp35M0QWN7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms