Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Gm3375-201ENSMUST00000203929 796 ntBASIC14.53□□□□□ -0.08
Shisa8J3QNX5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shisa8J3QNX5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Shisa8J3QNX5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shisa8J3QNX5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Gm11539-201ENSMUST00000119837 557 ntBASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.51□□□□□ -0.09
Shisa8J3QNX5 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shisa8J3QNX5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shisa8J3QNX5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms