Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Gm5417-201ENSMUST00000079706 384 ntBASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh1F7BJK1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh1F7BJK1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh1F7BJK1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh1F7BJK1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.33□□□□□ -0.11
Pcdh1F7BJK1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pcdh1F7BJK1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh1F7BJK1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Gm37055-201ENSMUST00000191866 133 ntBASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh1F7BJK1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Gm16061-201ENSMUST00000122167 857 ntBASIC14.31□□□□□ -0.12
Pcdh1F7BJK1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms