Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6F6VAN0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atf6F6VAN0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Atf6F6VAN0 App-207ENSMUST00000227737 2827 ntBASIC16.33■□□□□ 0.21
Atf6F6VAN0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Atf6F6VAN0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Atf6F6VAN0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Atf6F6VAN0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Atf6F6VAN0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.32■□□□□ 0.2
Atf6F6VAN0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.32■□□□□ 0.2
Atf6F6VAN0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Atf6F6VAN0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.31■□□□□ 0.2
Atf6F6VAN0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atf6F6VAN0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Atf6F6VAN0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atf6F6VAN0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms