Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb9E9Q5G2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Gm27646-201ENSMUST00000183989 110 ntBASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb9E9Q5G2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Pcdhb9E9Q5G2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb9E9Q5G2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb9E9Q5G2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb9E9Q5G2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb9E9Q5G2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Pcdhb9E9Q5G2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb9E9Q5G2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb9E9Q5G2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Gm8344-201ENSMUST00000119813 856 ntBASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Mir5131-201ENSMUST00000175426 93 ntBASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Gm2651-201ENSMUST00000203560 838 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms