Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx8D3YU81 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfx8D3YU81 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.84■□□□□ 0.29
Rfx8D3YU81 Gm15372-201ENSMUST00000120729 834 ntBASIC16.84■□□□□ 0.29
Rfx8D3YU81 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.84■□□□□ 0.29
Rfx8D3YU81 Gm44454-201ENSMUST00000198541 138 ntBASIC16.84■□□□□ 0.29
Rfx8D3YU81 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.84■□□□□ 0.29
Rfx8D3YU81 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.84■□□□□ 0.29
Rfx8D3YU81 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx8D3YU81 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx8D3YU81 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Rfx8D3YU81 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.83■□□□□ 0.28
Rfx8D3YU81 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Mir6404-201ENSMUST00000183699 94 ntBASIC16.83■□□□□ 0.28
Rfx8D3YU81 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx8D3YU81 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.82■□□□□ 0.28
Rfx8D3YU81 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.82■□□□□ 0.28
Rfx8D3YU81 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx8D3YU81 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx8D3YU81 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.81■□□□□ 0.28
Rfx8D3YU81 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx8D3YU81 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rfx8D3YU81 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx8D3YU81 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx8D3YU81 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.81■□□□□ 0.28
Rfx8D3YU81 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx8D3YU81 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms