Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Gm7063-201ENSMUST00000186840 981 ntBASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Clrn2B2RVW2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Clrn2B2RVW2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn2B2RVW2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn2B2RVW2 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Gm6257-201ENSMUST00000163864 910 ntBASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Gm19164-201ENSMUST00000210667 640 ntBASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn2B2RVW2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Gm18489-201ENSMUST00000172565 551 ntBASIC18.32■□□□□ 0.52
Clrn2B2RVW2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clrn2B2RVW2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms