Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm14767-201ENSMUST00000121559 586 ntBASIC11.93□□□□□ -0.5
Col6a5A6H584 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.93□□□□□ -0.5
Col6a5A6H584 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Gm9063-201ENSMUST00000223299 582 ntBASIC11.93□□□□□ -0.5
Col6a5A6H584 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Gm3786-201ENSMUST00000202659 378 ntBASIC11.92□□□□□ -0.5
Col6a5A6H584 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.92□□□□□ -0.5
Col6a5A6H584 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Gm5953-201ENSMUST00000220644 2616 ntBASIC11.92□□□□□ -0.5
Col6a5A6H584 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col6a5A6H584 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col6a5A6H584 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col6a5A6H584 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.91□□□□□ -0.5
Col6a5A6H584 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.91□□□□□ -0.5
Col6a5A6H584 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.91□□□□□ -0.5
Col6a5A6H584 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col6a5A6H584 Gm8515-201ENSMUST00000194852 576 ntBASIC11.91□□□□□ -0.5
Col6a5A6H584 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col6a5A6H584 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col6a5A6H584 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC11.91□□□□□ -0.5
Col6a5A6H584 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.9□□□□□ -0.5
Col6a5A6H584 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Gm9824-201ENSMUST00000178707 561 ntBASIC11.9□□□□□ -0.5
Col6a5A6H584 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.9□□□□□ -0.5
Col6a5A6H584 Gm6888-201ENSMUST00000221983 706 ntBASIC11.9□□□□□ -0.5
Col6a5A6H584 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.9□□□□□ -0.5
Col6a5A6H584 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col6a5A6H584 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms