Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.57■□□□□ 0.4
Krt28A6BLY7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Gm27622-201ENSMUST00000183779 60 ntBASIC17.57■□□□□ 0.4
Krt28A6BLY7 Gm20553-201ENSMUST00000204205 844 ntBASIC17.57■□□□□ 0.4
Krt28A6BLY7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt28A6BLY7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Krt28A6BLY7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Gm11424-201ENSMUST00000121929 829 ntBASIC17.56■□□□□ 0.4
Krt28A6BLY7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.56■□□□□ 0.4
Krt28A6BLY7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt28A6BLY7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.55■□□□□ 0.4
Krt28A6BLY7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.55■□□□□ 0.4
Krt28A6BLY7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt28A6BLY7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.55■□□□□ 0.4
Krt28A6BLY7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt28A6BLY7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.54■□□□□ 0.4
Krt28A6BLY7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.54■□□□□ 0.4
Krt28A6BLY7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt28A6BLY7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Gm10253-201ENSMUST00000194270 940 ntBASIC17.53■□□□□ 0.4
Krt28A6BLY7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt28A6BLY7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Krt28A6BLY7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Krt28A6BLY7 Rarb-207ENSMUST00000225921 2756 ntBASIC17.52■□□□□ 0.4
Krt28A6BLY7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.52■□□□□ 0.4
Krt28A6BLY7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Krt28A6BLY7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt28A6BLY7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms