Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm5640A3KG49 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm5640A3KG49 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gm5640A3KG49 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.17■□□□□ 0.18
Gm5640A3KG49 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.17■□□□□ 0.18
Gm5640A3KG49 Gm18666-201ENSMUST00000190039 958 ntBASIC16.17■□□□□ 0.18
Gm5640A3KG49 Gm36967-201ENSMUST00000193814 266 ntBASIC16.17■□□□□ 0.18
Gm5640A3KG49 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.17■□□□□ 0.18
Gm5640A3KG49 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm5640A3KG49 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm5640A3KG49 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Gm13186-201ENSMUST00000118031 316 ntBASIC16.15■□□□□ 0.18
Gm5640A3KG49 Gm12441-201ENSMUST00000121806 588 ntBASIC16.15■□□□□ 0.18
Gm5640A3KG49 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Gm38027-201ENSMUST00000192315 235 ntBASIC16.15■□□□□ 0.18
Gm5640A3KG49 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm5640A3KG49 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms