Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Gm13597-201ENSMUST00000121239 375 ntBASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm28729A0A1B0GSW2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Gm9682-201ENSMUST00000197505 556 ntBASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm28729A0A1B0GSW2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm28729A0A1B0GSW2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
Gm28729A0A1B0GSW2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm28729A0A1B0GSW2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Gm17968-201ENSMUST00000194902 784 ntBASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Gm19164-201ENSMUST00000210667 640 ntBASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm28729A0A1B0GSW2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm28729A0A1B0GSW2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28729A0A1B0GSW2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Gm28729A0A1B0GSW2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.43■□□□□ 0.06
Gm28729A0A1B0GSW2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28729A0A1B0GSW2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm28729A0A1B0GSW2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.43■□□□□ 0.06
Gm28729A0A1B0GSW2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms