Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.25□□□□□ -0.29
Lnp1A0A1B0GSK3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lnp1A0A1B0GSK3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Olfr129-201ENSMUST00000122318 993 ntBASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lnp1A0A1B0GSK3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm7284-201ENSMUST00000131667 944 ntBASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lnp1A0A1B0GSK3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms