Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Asic1-205ENSMUST00000228185 1818 ntBASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav9d-4A0A0G2JG37 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm12441-201ENSMUST00000121806 588 ntBASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm9731-201ENSMUST00000209480 747 ntBASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Trav9d-4A0A0G2JG37 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms