Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-4A0A0G2JG01 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13n-4A0A0G2JG01 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13n-4A0A0G2JG01 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav13n-4A0A0G2JG01 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Trav13n-4A0A0G2JG01 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav13n-4A0A0G2JG01 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms