Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav4-3A0A0B4J1K1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm18025-201ENSMUST00000221733 862 ntBASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav4-3A0A0B4J1K1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm2011-201ENSMUST00000203124 1263 ntBASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav4-3A0A0B4J1K1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm2559-201ENSMUST00000201323 363 ntBASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Gm10033-202ENSMUST00000211874 928 ntBASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC10.85□□□□□ -0.67
Trav4-3A0A0B4J1K1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms