Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trdv1A0A075B657 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.14□□□□□ -0.47
Trdv1A0A075B657 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trdv1A0A075B657 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.14□□□□□ -0.47
Trdv1A0A075B657 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.14□□□□□ -0.47
Trdv1A0A075B657 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trdv1A0A075B657 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trdv1A0A075B657 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Gm7370-201ENSMUST00000219471 767 ntBASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trdv1A0A075B657 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.11□□□□□ -0.47
Trdv1A0A075B657 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Gm13168-201ENSMUST00000121771 632 ntBASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Gm16061-201ENSMUST00000122167 857 ntBASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trdv1A0A075B657 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms