Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Gm15565-201ENSMUST00000118890 427 ntBASIC13.05□□□□□ -0.32
Trav18A0A075B656 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.05□□□□□ -0.32
Trav18A0A075B656 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Sybu-209ENSMUST00000228639 4113 ntBASIC13.05□□□□□ -0.32
Trav18A0A075B656 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav18A0A075B656 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.04□□□□□ -0.32
Trav18A0A075B656 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.04□□□□□ -0.32
Trav18A0A075B656 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Gm21559-201ENSMUST00000220638 855 ntBASIC13.04□□□□□ -0.32
Trav18A0A075B656 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Gm8587-201ENSMUST00000076538 843 ntBASIC13.04□□□□□ -0.32
Trav18A0A075B656 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.04□□□□□ -0.32
Trav18A0A075B656 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav18A0A075B656 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.03□□□□□ -0.32
Trav18A0A075B656 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.03□□□□□ -0.32
Trav18A0A075B656 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav18A0A075B656 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav18A0A075B656 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms