Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.33□□□□□ -0.44
Trav16A0A075B653 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav16A0A075B653 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Gm38027-201ENSMUST00000192315 235 ntBASIC12.32□□□□□ -0.44
Trav16A0A075B653 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Gm20049-201ENSMUST00000219950 730 ntBASIC12.32□□□□□ -0.44
Trav16A0A075B653 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav16A0A075B653 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trav16A0A075B653 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.31□□□□□ -0.44
Trav16A0A075B653 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav16A0A075B653 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trav16A0A075B653 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.3□□□□□ -0.44
Trav16A0A075B653 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Gm15378-201ENSMUST00000121894 207 ntBASIC12.3□□□□□ -0.44
Trav16A0A075B653 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav16A0A075B653 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav16A0A075B653 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav16A0A075B653 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms