Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Gm21559-201ENSMUST00000220638 855 ntBASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Gm8587-201ENSMUST00000076538 843 ntBASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-4A0A075B652 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Gm18101-201ENSMUST00000215769 548 ntBASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-4A0A075B652 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Gm37722-201ENSMUST00000193757 208 ntBASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-4A0A075B652 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5-4A0A075B652 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms