Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav8-1A0A075B641 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 AV356131-201ENSMUST00000206201 750 ntBASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav8-1A0A075B641 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Gm7290-201ENSMUST00000104990 617 ntBASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Gm12918-201ENSMUST00000120234 636 ntBASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Gm15710-201ENSMUST00000121821 636 ntBASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Gm5075-201ENSMUST00000196916 622 ntBASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav8-1A0A075B641 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Gm6211-202ENSMUST00000167849 925 ntBASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Gm44549-201ENSMUST00000208351 577 ntBASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trav8-1A0A075B641 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms