Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav4-2A0A075B638 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Gm18421-201ENSMUST00000204122 625 ntBASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-2A0A075B638 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Gm18284-201ENSMUST00000172604 624 ntBASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-2A0A075B638 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-2A0A075B638 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms