Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Gm13186-201ENSMUST00000118031 316 ntBASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16nA0A075B634 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16nA0A075B634 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Gm18115-201ENSMUST00000221209 621 ntBASIC12.04□□□□□ -0.48
Trav16nA0A075B634 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16nA0A075B634 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16nA0A075B634 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms