Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9n-4A0A075B631 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9n-4A0A075B631 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9n-4A0A075B631 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav9n-4A0A075B631 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Gm15442-201ENSMUST00000117905 1527 ntBASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Gm13559-201ENSMUST00000120476 863 ntBASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Gm7889-201ENSMUST00000185591 958 ntBASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav9n-4A0A075B631 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 AC153526.5-201ENSMUST00000218661 2147 ntBASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Ntrk2-205ENSMUST00000224402 2284 ntBASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav9n-4A0A075B631 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav9n-4A0A075B631 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms